Ayato Kamina, a 17-year-old high school student, lives in Tokyo Jupiter oblivious to the world around him, having been raised to believe that the rest of civilization has been destroyed; but everything changes when a mysterious alien civilization invades his home.
| Title | Time | |
|---|---|---|
| 1 | Invasion of the Capital | 2002-01-21 |
| 2 | God and Man Awaken | 2002-01-28 |
| 3 | City of Two | 2002-02-04 |
| 4 | His own Watch | 2002-02-18 |
| 5 | Nirai-Kanai | 2002-02-25 |
| 6 | Obliterated Cities | 2002-03-04 |
| 7 | Day of Assembly | 2002-03-11 |
| 8 | Bitterly Cold Holy Night | 2002-03-18 |
| 9 | Small Shrine of Time | 2002-03-25 |
| 10 | Sonata of Recollection | 2002-04-16 |
| 11 | Kyoja Circuit | 2002-04-23 |
| 12 | The Black Egg | 2002-04-30 |
| 13 | Human Specimen #1 | 2002-05-07 |
| 14 | The Boy in the Mirror | 2002-05-21 |
| 15 | The Children's Night | 2002-05-28 |
| 16 | Island of Others | 2002-06-04 |
| 17 | Return to the Labyrinth | 2002-06-11 |
| 18 | The Bond of Blue Blood | 2002-06-18 |
| 19 | Blue Friend | 2002-06-25 |
| 20 | The Artisan's Battle | 2002-07-02 |
| 21 | The Carved Seal of Xephon | 2002-07-30 |
| 22 | Operation Jupiter Obliteration | 2002-08-06 |
| 23 | From Here to Eternity | 2002-08-13 |
| 24 | Doorway to the Tuning | 2002-08-20 |
| 25 | God's Uncertain Music | 2002-08-27 |
| 26 | Far Beyond Eternity | 2002-09-10 |